Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | FIB35_23430 | Not Available | Negative | 4568085 - 4568476 | 14131.8 |
| ribulose-phosphate 3-epimerase | FIB35_23435 | Not Available | Negative | 4568574 - 4568795 | 8046.77 |
| type 1 fimbrial protein subunit fima | FIB35_23440 | Not Available | Positive | 4568839 - 4569381 | 18475.5 |
| dna-binding transcriptional activator ttdr | FIB35_23445 | Not Available | Negative | 4569502 - 4569971 | 17614.1 |
| ygcg family protein | FIB35_23450 | Not Available | Negative | 4570207 - 4570737 | 19999.8 |
| hypothetical protein | FIB35_23455 | Not Available | Negative | 4570751 - 4570891 | 5383.44 |
| aminotransferase class v-fold plp-dependent enzyme | FIB35_23465 | Not Available | Positive | 4571598 - 4572290 | 25114.9 |
| radical sam protein | FIB35_23470 | Not Available | Negative | 4572291 - 4572786 | 19163.7 |
| is1 family transposase | FIB35_23475 | Not Available | Negative | 4572873 - 4572981 | 4160.06 |
| ecotin | FIB35_23480 | Not Available | Positive | 4573041 - 4573529 | 18193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





