Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | FIB35_21915 | Not Available | Positive | 4347975 - 4349203 | 45198.1 |
| nitrite transporter nirc | FIB35_21920 | Not Available | Positive | 4349220 - 4350026 | 28564.1 |
| uroporphyrinogen-iii c-methyltransferase | FIB35_21925 | Not Available | Positive | 4350045 - 4351418 | 49954.4 |
| type 1 fimbriae chaperone fimc | FIB35_21930 | Not Available | Negative | 4351509 - 4352234 | 26660.5 |
| type 1 fimbrial protein subunit fima | FIB35_21940 | Not Available | Negative | 4352875 - 4353429 | 18624.9 |
| lipopolysaccharide 1,3-galactosyltransferase | FIB35_21945 | Not Available | Negative | 4353644 - 4354382 | 28234.8 |
| lipopolysaccharide 1,6-galactosyltransferase | FIB35_21950 | Not Available | Negative | 4354382 - 4355461 | 40828.1 |
| lps core biosynthesis protein rfas | FIB35_21955 | Not Available | Negative | 4355505 - 4355805 | 11667.9 |
| lexa family transcriptional regulator | FIB35_21960 | Not Available | Negative | 4355902 - 4356597 | 25768.6 |
| helix-turn-helix transcriptional regulator | FIB35_21965 | Not Available | Positive | 4356673 - 4356888 | 7829.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





