Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | FIB35_21350 | Not Available | Negative | 4255089 - 4256522 | 54182.2 |
| duf3987 domain-containing protein | FIB35_21355 | Not Available | Negative | 4256771 - 4256998 | 8107.75 |
| alpa family phage regulatory protein | FIB35_21360 | Not Available | Negative | 4257104 - 4257331 | 8968.01 |
| methionine adenosyltransferase | FIB35_21365 | Not Available | Negative | 4257603 - 4258757 | 41954.0 |
| acid stress response protein yqgb | FIB35_21370 | Not Available | Positive | 4259412 - 4259543 | 4859.08 |
| arginine decarboxylase | FIB35_21375 | Not Available | Positive | 4259552 - 4260162 | 22932.7 |
| duf1435 domain-containing protein | FIB35_21380 | Not Available | Negative | 4260264 - 4260500 | 8663.28 |
| siderophore-iron reductase fhuf | FIB35_21385 | Not Available | Positive | 4260641 - 4261429 | 30024.2 |
| dna-binding transcriptional activator bglj | FIB35_21390 | Not Available | Negative | 4261467 - 4262144 | 25593.1 |
| response regulator transcription factor | FIB35_21395 | Not Available | Negative | 4262102 - 4262827 | 27093.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





