Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 4138473 - 4138548 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4138557 - 4138633 | Not Available |
| hypothetical protein | FIB35_20680 | Not Available | Negative | 4138683 - 4138883 | 6458.82 |
| nickel-responsive transcriptional regulator nikr | FIB35_20685 | Not Available | Negative | 4139086 - 4139487 | 15094.7 |
| nickel import atp-binding protein nike | FIB35_20690 | Not Available | Negative | 4139493 - 4140299 | 29723.5 |
| nickel import atp-binding protein nikd | FIB35_20695 | Not Available | Negative | 4140296 - 4141060 | 26822.1 |
| nickel abc transporter permease subunit nikc | FIB35_20700 | Not Available | Negative | 4141060 - 4141893 | 30363.8 |
| nickel abc transporter permease subunit nikb | FIB35_20705 | Not Available | Negative | 4141890 - 4142001 | 4038.13 |
| is1 family transposase | FIB35_20710 | Not Available | Positive | 4142002 - 4142112 | 4273.23 |
| hypothetical protein | FIB35_20720 | Not Available | Positive | 4144579 - 4144845 | 9658.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





