Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-serine ammonia-lyase | FIB35_19235 | Not Available | Negative | 3890672 - 3892000 | 47873.3 |
| d-serine transporter dsdx | FIB35_19240 | Not Available | Negative | 3892018 - 3893355 | 47166.2 |
| dna-binding transcriptional regulator dsdc | FIB35_19245 | Not Available | Positive | 3893573 - 3894508 | 35322.2 |
| response regulator inhibitor tori | FIB35_19250 | Not Available | Negative | 3894692 - 3894892 | 7678.32 |
| hypothetical protein | FIB35_19255 | Not Available | Negative | 3894950 - 3895076 | 4875.67 |
| type 1 fimbrial protein | FIB35_19260 | Not Available | Positive | 3895117 - 3895638 | 18402.4 |
| fimbrial protein | FIB35_19270 | Not Available | Positive | 3898385 - 3899137 | 27763.5 |
| hypothetical protein | FIB35_19275 | Not Available | Positive | 3899153 - 3899593 | 15466.5 |
| duf2542 family protein | FIB35_19280 | Not Available | Negative | 3899594 - 3899808 | 8196.22 |
| outer membrane permeability protein sana | FIB35_19285 | Not Available | Negative | 3899811 - 3900530 | 27288.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





