Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase fdra | FIB35_18905 | Not Available | Positive | 3830156 - 3831823 | 58532.3 |
| duf1116 domain-containing protein | FIB35_18910 | Not Available | Positive | 3831833 - 3833092 | 44951.6 |
| duf2877 domain-containing protein | FIB35_18915 | Not Available | Positive | 3833103 - 3833918 | 29599.8 |
| carbamate kinase | FIB35_18920 | Not Available | Positive | 3833915 - 3834808 | 31704.1 |
| cadaverine/lysine antiporter | FIB35_18925 | Not Available | Positive | 3834829 - 3835919 | 38456.5 |
| lysine decarboxylase cada | FIB35_18930 | Not Available | Positive | 3835999 - 3838146 | 81264.7 |
| dipeptide/tripeptide permease dtpc | FIB35_18935 | Not Available | Positive | 3838205 - 3839584 | 50199.3 |
| replication initiation protein | FIB35_18940 | Not Available | Positive | 3839816 - 3840535 | 27593.1 |
| hypothetical protein | FIB35_18945 | Not Available | Positive | 3840808 - 3841218 | 14580.4 |
| is5 family transposase | FIB35_18950 | Not Available | Positive | 3841576 - 3842499 | 34912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





