Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase pdec | FIB35_17545 | Not Available | Positive | 3573672 - 3574544 | 33483.7 |
| superoxide response transcriptional regulator soxs | FIB35_17550 | Not Available | Negative | 3574547 - 3574870 | 12911.6 |
| redox-sensitive transcriptional activator soxr | FIB35_17555 | Not Available | Positive | 3574956 - 3575420 | 17150.7 |
| ncs2 family permease | FIB35_17560 | Not Available | Positive | 3575966 - 3577315 | 45714.4 |
| na+/h+ antiporter | FIB35_17565 | Not Available | Positive | 3577467 - 3579116 | 60527.5 |
| hypothetical protein | FIB35_17570 | Not Available | Negative | 3579270 - 3579564 | 10921.9 |
| hydratase | FIB35_17575 | Not Available | Positive | 3579565 - 3581436 | 67482.3 |
| putative acyl-coa thioester hydrolase | FIB35_17580 | Not Available | Negative | 3581670 - 3582953 | 46084.7 |
| integrase | FIB35_17585 | Not Available | Negative | 3583088 - 3584158 | 40281.4 |
| excisionase | FIB35_17590 | Not Available | Negative | 3584136 - 3584354 | 8635.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





