Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | FIB35_16165 | Not Available | Negative | 3299331 - 3301810 | 92958.8 |
| duf2498 family protein | FIB35_16170 | Not Available | Positive | 3302190 - 3302441 | 9386.17 |
| protease sohb | FIB35_16175 | Not Available | Negative | 3302477 - 3303526 | 39368.7 |
| ycik family oxidoreductase | FIB35_16180 | Not Available | Positive | 3303746 - 3304504 | 27934.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | FIB35_16185 | Not Available | Positive | 3304501 - 3305091 | 22000.2 |
| 23s rrna pseudouridine(2605) synthase rlub | FIB35_16190 | Not Available | Negative | 3305131 - 3306006 | 32713.4 |
| sigma-54-dependent transcriptional regulator | FIB35_16195 | Not Available | Positive | 3306419 - 3308197 | 66100.0 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | FIB35_16200 | Not Available | Negative | 3308237 - 3308716 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | FIB35_16205 | Not Available | Negative | 3308713 - 3309591 | 31584.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | FIB35_16210 | Not Available | Negative | 3309602 - 3311899 | 82663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





