Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit f | FIB35_14065 | Not Available | Negative | 2876142 - 2876231 | 3071.95 |
| duf2517 family protein | FIB35_14070 | Not Available | Positive | 2876544 - 2876750 | 8275.0 |
| hypothetical protein | FIB35_14075 | Not Available | Positive | 2876993 - 2877214 | 7196.81 |
| alpha,alpha-trehalase tref | FIB35_14080 | Not Available | Positive | 2877324 - 2878973 | 63700.1 |
| response regulator transcription factor | FIB35_14085 | Not Available | Negative | 2879024 - 2879626 | 22605.6 |
| lysr family transcriptional regulator | FIB35_14090 | Not Available | Positive | 2880146 - 2881045 | 33331.6 |
| inner membrane protein yhjd | FIB35_14095 | Not Available | Positive | 2881094 - 2882107 | 37913.6 |
| mhs family mfs transporter | FIB35_14100 | Not Available | Positive | 2882518 - 2883840 | 47210.9 |
| asma family protein | FIB35_14105 | Not Available | Negative | 2884022 - 2885917 | 68511.3 |
| Trna-asp | Not Available | Not Available | Positive | 2886091 - 2886167 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





