Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | FIB35_13185 | Not Available | Positive | 2709173 - 2709910 | 26013.2 |
| imidazole glycerol phosphate synthase subunit hisf | FIB35_13190 | Not Available | Positive | 2709892 - 2710668 | 28456.1 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | FIB35_13195 | Not Available | Positive | 2710662 - 2711273 | 22886.2 |
| lps o-antigen chain length determinant protein wzzb | FIB35_13200 | Not Available | Negative | 2711369 - 2712346 | 36392.8 |
| udp-glucose 6-dehydrogenase | FIB35_13205 | Not Available | Negative | 2712492 - 2713530 | 39063.6 |
| gnat family n-acetyltransferase | FIB35_13210 | Not Available | Negative | 2713589 - 2714578 | 37096.5 |
| d-tyrosyl-trna(tyr) deacylase | FIB35_13215 | Not Available | Negative | 2714575 - 2715012 | 15951.0 |
| virulence factor brkb family protein | FIB35_13220 | Not Available | Negative | 2715009 - 2715881 | 32840.7 |
| glucose-1-phosphatase | FIB35_13225 | Not Available | Negative | 2715875 - 2716474 | 22747.1 |
| deor/glpr transcriptional regulator | FIB35_13230 | Not Available | Negative | 2716573 - 2717358 | 28509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





