Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clamp-binding protein crfc | FIB35_12100 | Not Available | Negative | 2488481 - 2490664 | 82549.8 |
| brnt family toxin | FIB35_12105 | Not Available | Positive | 2490712 - 2490999 | 11296.4 |
| brna antitoxin family protein | FIB35_12110 | Not Available | Positive | 2490986 - 2491288 | 11522.6 |
| gtpase | FIB35_12115 | Not Available | Negative | 2491322 - 2492278 | 35722.9 |
| ybdd/yjix family protein | FIB35_12120 | Not Available | Negative | 2492289 - 2492492 | 7729.24 |
| pyruvate/proton symporter btst | FIB35_12125 | Not Available | Negative | 2492542 - 2494692 | 77314.5 |
| methyl-accepting chemotaxis protein | FIB35_12130 | Not Available | Positive | 2495069 - 2496733 | 59827.9 |
| mfs transporter | FIB35_12135 | Not Available | Negative | 2496782 - 2498143 | 49402.4 |
| gntr family transcriptional regulator | FIB35_12140 | Not Available | Negative | 2498358 - 2499272 | 35390.2 |
| zinc-binding alcohol dehydrogenase family protein | FIB35_12145 | Not Available | Positive | 2499411 - 2500433 | 36435.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





