Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic nitric oxide reductase flavorubredoxin | FIB35_10990 | Not Available | Positive | 2263809 - 2265248 | 54210.0 |
| nadh:flavorubredoxin reductase norw | FIB35_10995 | Not Available | Positive | 2265245 - 2266378 | 41406.1 |
| carbamoyltransferase hypf | FIB35_11000 | Not Available | Negative | 2266506 - 2268758 | 82054.6 |
| electron transport protein hydn | FIB35_11005 | Not Available | Negative | 2268911 - 2269438 | 19027.2 |
| duf1161 domain-containing protein | FIB35_11010 | Not Available | Negative | 2269575 - 2269880 | 10477.2 |
| ynfc family lipoprotein | FIB35_11015 | Not Available | Positive | 2269988 - 2270698 | 26508.3 |
| spermidine n1-acetyltransferase | FIB35_11020 | Not Available | Negative | 2270701 - 2271261 | 21888.2 |
| duf1283 family protein | FIB35_11025 | Not Available | Negative | 2271296 - 2271637 | 12909.3 |
| ynfa family protein | FIB35_11030 | Not Available | Positive | 2271772 - 2272098 | 11920.2 |
| starvation-sensing protein rspa | FIB35_11035 | Not Available | Positive | 2272304 - 2273518 | 45985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





