Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase small subunit | FIB35_02540 | Not Available | Positive | 514466 - 515116 | 24352.8 |
| Terminase large subunit | FIB35_02545 | Not Available | Positive | 515113 - 516675 | 59146.8 |
| Portal protein | FIB35_02550 | Not Available | Positive | 516686 - 518161 | 54625.0 |
| Phage head morphogenesis | FIB35_02555 | Not Available | Positive | 518088 - 519086 | 37366.1 |
| hypothetical protein | FIB35_02560 | Not Available | Negative | 519091 - 519279 | 7262.64 |
| Hypothetical protein | FIB35_02565 | Not Available | Positive | 519345 - 520733 | 51281.2 |
| Capsid protein | FIB35_02570 | Not Available | Positive | 520737 - 521165 | 15221.2 |
| Capsid protein | FIB35_02575 | Not Available | Positive | 521177 - 522271 | 40978.3 |
| Hypothetical protein | FIB35_02580 | Not Available | Positive | 522281 - 522658 | 13385.7 |
| Hypothetical protein | FIB35_02585 | Not Available | Positive | 522661 - 523041 | 13011.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





