Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein ynek | FIB35_09890 | Not Available | Negative | 2057430 - 2057555 | 4663.71 |
| lysr family transcriptional regulator | FIB35_09895 | Not Available | Negative | 2057633 - 2058514 | 32484.9 |
| succinate-semialdehyde dehydrogenase | FIB35_09900 | Not Available | Positive | 2058615 - 2060003 | 49720.7 |
| glutaminase b | FIB35_09905 | Not Available | Positive | 2060067 - 2060993 | 33545.6 |
| duf4186 domain-containing protein | FIB35_09910 | Not Available | Positive | 2060993 - 2061376 | 14526.8 |
| tagaturonate reductase | FIB35_09920 | Not Available | Positive | 2063135 - 2064586 | 54811.3 |
| hypothetical protein | FIB35_09925 | Not Available | Positive | 2064793 - 2065707 | 34810.0 |
| trans-aconitate 2-methyltransferase | FIB35_09930 | Not Available | Negative | 2065711 - 2066469 | 28981.5 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | FIB35_09935 | Not Available | Negative | 2066526 - 2066816 | 11255.4 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | FIB35_09940 | Not Available | Negative | 2066840 - 2067715 | 31866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





