Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator rutr | FIB35_08975 | Not Available | Positive | 1883463 - 1884101 | 23688.9 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | FIB35_08980 | Not Available | Negative | 1884141 - 1888103 | 143824.0 |
| hypothetical protein | FIB35_08985 | Not Available | Positive | 1888158 - 1888367 | 7779.91 |
| sodium/proline symporter putp | FIB35_08990 | Not Available | Positive | 1888526 - 1890034 | 54347.3 |
| ftr1 family protein | FIB35_08995 | Not Available | Positive | 1890577 - 1891407 | 30345.7 |
| iron uptake system protein efeo | FIB35_09000 | Not Available | Positive | 1891465 - 1892592 | 41139.8 |
| deferrochelatase/peroxidase efeb | FIB35_09005 | Not Available | Positive | 1892598 - 1893869 | 46784.9 |
| phosphate starvation-inducible protein phoh | FIB35_09010 | Not Available | Positive | 1894214 - 1895278 | 39267.1 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | FIB35_09015 | Not Available | Negative | 1895328 - 1895741 | 16112.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | FIB35_09020 | Not Available | Negative | 1895743 - 1896981 | 47471.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





