Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator gcva | FIB35_08060 | Not Available | Positive | 1704074 - 1704991 | 34403.4 |
| duf423 domain-containing protein | FIB35_08065 | Not Available | Positive | 1705010 - 1705405 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | FIB35_08070 | Not Available | Positive | 1705398 - 1706498 | 41907.5 |
| l-fucose operon activator | FIB35_08075 | Not Available | Negative | 1706542 - 1707273 | 27363.7 |
| l-fucose mutarotase | FIB35_08080 | Not Available | Negative | 1707331 - 1707753 | 15474.0 |
| l-fuculokinase | FIB35_08085 | Not Available | Negative | 1707755 - 1709173 | 52261.7 |
| l-fucose isomerase | FIB35_08090 | Not Available | Negative | 1709282 - 1711057 | 64980.3 |
| l-fucose-proton symporter | FIB35_08095 | Not Available | Negative | 1711090 - 1712406 | 47547.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | FIB35_08100 | Not Available | Positive | 1712674 - 1714027 | 48449.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | FIB35_08105 | Not Available | Positive | 1714024 - 1715382 | 47449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





