Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | FIB35_06245 | Not Available | Positive | 1283779 - 1285770 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit iii | FIB35_06250 | Not Available | Positive | 1285760 - 1286374 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit iv | FIB35_06255 | Not Available | Positive | 1286374 - 1286703 | 12030.2 |
| protoheme ix farnesyltransferase | FIB35_06260 | Not Available | Positive | 1286715 - 1287605 | 32250.4 |
| mfs transporter | FIB35_06265 | Not Available | Positive | 1287754 - 1289118 | 48813.0 |
| yajq family cyclic di-gmp-binding protein | FIB35_06270 | Not Available | Negative | 1289246 - 1289737 | 18344.9 |
| 2-dehydropantoate 2-reductase | FIB35_06275 | Not Available | Positive | 1289905 - 1290816 | 33872.8 |
| protein deglycase yajl | FIB35_06280 | Not Available | Positive | 1290779 - 1291369 | 20778.3 |
| trna 4-thiouridine(8) synthase thii | FIB35_06285 | Not Available | Negative | 1291423 - 1292871 | 54976.3 |
| exodeoxyribonuclease vii small subunit | FIB35_06290 | Not Available | Positive | 1293077 - 1293319 | 8952.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





