Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | FIB35_05480 | Not Available | Positive | 1120325 - 1120600 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | FIB35_05485 | Not Available | Positive | 1120619 - 1122727 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | FIB35_05490 | Not Available | Positive | 1122734 - 1123423 | 25344.6 |
| atp-dependent dna helicase recg | FIB35_05495 | Not Available | Positive | 1123429 - 1125510 | 76435.1 |
| sodium/glutamate symporter | FIB35_05500 | Not Available | Negative | 1125679 - 1126884 | 42427.9 |
| acetate coa-transferase subunit alpha | FIB35_05505 | Not Available | Positive | 1127021 - 1127683 | 23527.7 |
| coa transferase subunit b | FIB35_05510 | Not Available | Positive | 1127683 - 1128333 | 22961.1 |
| tigr00366 family protein | FIB35_05515 | Not Available | Positive | 1128330 - 1129652 | 47530.6 |
| acetyl-coa c-acetyltransferase | FIB35_05520 | Not Available | Positive | 1129683 - 1130867 | 40386.0 |
| duf2135 domain-containing protein | FIB35_05525 | Not Available | Negative | 1130941 - 1131717 | 28305.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





