Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | FIB35_05280 | Not Available | Positive | 1083899 - 1085089 | 44359.5 |
| heat shock protein hspq | FIB35_05285 | Not Available | Positive | 1085147 - 1085464 | 11779.9 |
| coa-binding protein | FIB35_05290 | Not Available | Negative | 1085509 - 1085922 | 14702.0 |
| permease | FIB35_05295 | Not Available | Negative | 1086020 - 1086450 | 15803.5 |
| nad-dependent epimerase/dehydratase family protein | FIB35_05300 | Not Available | Negative | 1086523 - 1087158 | 23199.3 |
| protein/nucleic acid deglycase | FIB35_05305 | Not Available | Positive | 1087286 - 1087804 | 18845.4 |
| hypothetical protein | FIB35_05310 | Not Available | Negative | 1087784 - 1088227 | 16777.2 |
| dna damage response exodeoxyribonuclease yhbq | FIB35_05315 | Not Available | Positive | 1088278 - 1088580 | 11270.6 |
| n-acetyltransferase | FIB35_05320 | Not Available | Negative | 1088567 - 1089070 | 18534.8 |
| scp2 domain-containing protein | FIB35_05325 | Not Available | Negative | 1089064 - 1089588 | 19673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





