Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8887 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1129785 bp
Thymine Count
1128887 bp
Guanine Count
1184966 bp
Cytosine Count
1186536 bp
Genome Length
4630174 bp
Protein-coding Genes
4472 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | FIB35_05130 | Not Available | Positive | 1052233 - 1053951 | 63512.0 |
| heme lyase nrfefg subunit nrff | FIB35_05135 | Not Available | Positive | 1053944 - 1054327 | 14555.0 |
| heme lyase nrfefg subunit nrfg | FIB35_05140 | Not Available | Positive | 1054324 - 1054920 | 22773.5 |
| glutamate/aspartate:proton symporter gltp | FIB35_05145 | Not Available | Positive | 1055262 - 1056575 | 47107.0 |
| sel1 repeat family protein | FIB35_05150 | Not Available | Negative | 1056992 - 1057681 | 25080.4 |
| formate dehydrogenase subunit alpha | FIB35_05155 | Not Available | Negative | 1057775 - 1059922 | 79242.1 |
| multidrug efflux transporter outer membrane subunit mdtp | FIB35_05160 | Not Available | Negative | 1060120 - 1061586 | 53456.3 |
| multidrug efflux transporter permease subunit mdto | FIB35_05165 | Not Available | Negative | 1061583 - 1063634 | 76203.2 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | FIB35_05170 | Not Available | Negative | 1063634 - 1064665 | 36910.3 |
| hypothetical protein | FIB35_05175 | Not Available | Negative | 1064684 - 1064959 | 10257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





