Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8899 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1165646 bp
Thymine Count
1167467 bp
Guanine Count
1202229 bp
Cytosine Count
1208170 bp
Genome Length
4743512 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | FIB30_21960 | Not Available | Negative | 4492602 - 4493591 | 35234.5 |
| transcriptional regulator tdca | FIB30_21965 | Not Available | Negative | 4493690 - 4494628 | 34540.9 |
| dna-binding transcriptional activator tdcr | FIB30_21970 | Not Available | Positive | 4494817 - 4495161 | 13552.3 |
| hypothetical protein | FIB30_21975 | Not Available | Positive | 4495417 - 4495956 | 20636.6 |
| hypothetical protein | FIB30_21980 | Not Available | Positive | 4495978 - 4496811 | 31354.6 |
| Trna-asp | Not Available | Not Available | Positive | 4496981 - 4497057 | Not Available |
| 2,5-didehydrogluconate reductase dkgb | FIB30_21995 | Not Available | Positive | 4497220 - 4498023 | 29438.4 |
| lysr family transcriptional regulator | FIB30_22000 | Not Available | Negative | 4498020 - 4498934 | 33776.8 |
| endonuclease/exonuclease/phosphatase family protein | FIB30_22005 | Not Available | Positive | 4499175 - 4499975 | 29993.4 |
| methyltransferase domain-containing protein | FIB30_22010 | Not Available | Positive | 4500053 - 4500823 | 28406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





