Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8899 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1165646 bp
Thymine Count
1167467 bp
Guanine Count
1202229 bp
Cytosine Count
1208170 bp
Genome Length
4743512 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 4351018 - 4351380 | Not Available |
| ssra-binding protein smpb | FIB30_21050 | Not Available | Negative | 4351595 - 4352077 | 18270.1 |
| type ii toxin-antitoxin system toxin rata | FIB30_21055 | Not Available | Positive | 4352209 - 4352685 | 17743.7 |
| rnfh family protein | FIB30_21060 | Not Available | Positive | 4352675 - 4352965 | 10790.0 |
| outer membrane protein assembly factor bame | FIB30_21065 | Not Available | Negative | 4353027 - 4353368 | 12302.8 |
| dna repair protein recn | FIB30_21070 | Not Available | Negative | 4353517 - 4355178 | 61400.1 |
| nad(+) kinase | FIB30_21075 | Not Available | Negative | 4355264 - 4356142 | 32568.3 |
| nucleotide exchange factor grpe | FIB30_21080 | Not Available | Positive | 4356265 - 4356858 | 21813.1 |
| duf21 domain-containing protein | FIB30_21085 | Not Available | Negative | 4356913 - 4358199 | 48047.2 |
| inner membrane protein ypjd | FIB30_21090 | Not Available | Negative | 4358220 - 4359011 | 29236.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





