Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8899 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1165646 bp
Thymine Count
1167467 bp
Guanine Count
1202229 bp
Cytosine Count
1208170 bp
Genome Length
4743512 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine endoprotease degq | FIB30_10515 | Not Available | Positive | 2192229 - 2193596 | 47207.9 |
| outer membrane-stress sensor serine endopeptidase degs | FIB30_10520 | Not Available | Positive | 2193686 - 2194753 | 37613.4 |
| malate dehydrogenase | FIB30_10525 | Not Available | Negative | 2194815 - 2195753 | 32339.2 |
| transcriptional regulator argr | FIB30_10530 | Not Available | Positive | 2196188 - 2196658 | 16995.5 |
| peroxide/acid stress response protein yhcn | FIB30_10535 | Not Available | Positive | 2197023 - 2197286 | 9196.89 |
| hypothetical protein | FIB30_10540 | Not Available | Negative | 2197342 - 2197614 | 10796.7 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | FIB30_10545 | Not Available | Negative | 2197706 - 2199673 | 73614.9 |
| p-hydroxybenzoic acid efflux pump subunit aaea | FIB30_10550 | Not Available | Negative | 2199679 - 2200611 | 34776.5 |
| duf1656 domain-containing protein | FIB30_10555 | Not Available | Negative | 2200619 - 2200822 | 7847.01 |
| hth-type transcriptional activator aaer | FIB30_10560 | Not Available | Positive | 2201005 - 2201934 | 34518.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





