Escherichia coli strain KCJK8909

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8909 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. It is capable of mobility due to the presence of flagella, and it typically arranges itself in pairs or as singles. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. KCJK8909 is host-associated and demonstrates a free-living biotic relationship, indicating its ability to exist outside of a host organism. It has a diverse range of hosts, including Homo sapiens, various species of livestock such as Bos taurus and Sus scrofa, as well as numerous other animals and even plants like Solanum lycopersicum and Brassica oleracea var. italica. This wide host range suggests a significant ecological adaptability, allowing KCJK8909 to play various roles in different ecosystems. The strain is known for its pathogenic potential in humans, being implicated in a variety of health issues such as urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). It has been associated with foodborne infections and can lead to severe outcomes including renal failure and septicemia. The multifaceted pathogenicity of KCJK8909 highlights its importance in both clinical settings and public health. Understanding its traits and host interactions can inform strategies for managing infections and preventing outbreaks, emphasizing the need for ongoing research into its behavior and impact on health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8909

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8909
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8909

Gene Summary

Adenine Count

1160547 bp

Thymine Count

1159682 bp

Guanine Count

1197550 bp

Cytosine Count

1211413 bp

Genome Length

4729192 bp

Protein-coding Genes

4319 genes

Non-Coding Genes

247 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail proteinFIB26_16905Not AvailableNegative3519494 - 352133565536.5
hypothetical proteinFIB26_16910Not AvailableNegative3521328 - 35215107022.42
Putative bacteriophage proteinFIB26_16915Not AvailableNegative3521477 - 35217469958.99
Hypothetical proteinFIB26_16920Not AvailableNegative3521746 - 352210212890.0
Tail sheath proteinFIB26_16925Not AvailableNegative3522102 - 352359853179.7
Hypothetical proteinFIB26_16930Not AvailableNegative3523582 - 35237526393.55
Hypothetical proteinFIB26_16935Not AvailableNegative3523761 - 352432120805.3
Hypothetical proteinFIB26_16940Not AvailableNegative3524318 - 352482419763.9
Putative phage head-tail adaptorFIB26_16945Not AvailableNegative3524799 - 352520915689.6
Head-tail connector proteinFIB26_16950Not AvailableNegative3525206 - 352552912510.8

Displaying genes 81 – 90 of 4566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total