Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1160547 bp
Thymine Count
1159682 bp
Guanine Count
1197550 bp
Cytosine Count
1211413 bp
Genome Length
4729192 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | FIB26_17655 | Not Available | Positive | 3656338 - 3659097 | 100754.0 |
| type vi secretion system-associated protein tago | FIB26_17660 | Not Available | Positive | 3659094 - 3659837 | 26442.7 |
| type vi secretion system protein tssa | FIB26_17665 | Not Available | Positive | 3659842 - 3661254 | 52392.2 |
| type vi secretion system membrane subunit tssm | FIB26_17670 | Not Available | Positive | 3661363 - 3664797 | 130761.0 |
| hypothetical protein | FIB26_17675 | Not Available | Positive | 3664808 - 3666160 | 50779.5 |
| hcp family type vi secretion system effector | FIB26_17680 | Not Available | Positive | 3666184 - 3666666 | 18000.5 |
| hypothetical protein | FIB26_17685 | Not Available | Positive | 3666710 - 3667624 | 34053.5 |
| transcriptional regulator nrdr | FIB26_17690 | Not Available | Positive | 3667747 - 3668070 | 12385.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | FIB26_17695 | Not Available | Positive | 3668074 - 3669177 | 40345.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | FIB26_17700 | Not Available | Positive | 3669266 - 3669736 | 16157.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





