Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8909 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1160547 bp
Thymine Count
1159682 bp
Guanine Count
1197550 bp
Cytosine Count
1211413 bp
Genome Length
4729192 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl-d-mannosamine dehydrogenase | FIB26_15375 | Not Available | Positive | 3218319 - 3219581 | 45841.3 |
| dtdp-glucose 4,6-dehydratase | FIB26_15380 | Not Available | Positive | 3219581 - 3220648 | 39796.0 |
| glucose-1-phosphate thymidylyltransferase rfba | FIB26_15385 | Not Available | Positive | 3220667 - 3221548 | 32736.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | FIB26_15390 | Not Available | Positive | 3221526 - 3222200 | 24316.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | FIB26_15395 | Not Available | Positive | 3222205 - 3223335 | 41922.4 |
| lipid iii flippase wzxe | FIB26_15400 | Not Available | Positive | 3223337 - 3224587 | 44990.4 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | FIB26_15405 | Not Available | Positive | 3224584 - 3225663 | 40491.6 |
| o-antigen assembly polymerase | FIB26_15410 | Not Available | Positive | 3225660 - 3227012 | 51520.2 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | FIB26_15415 | Not Available | Positive | 3227015 - 3227755 | 27991.9 |
| amino acid permease | FIB26_15420 | Not Available | Positive | 3227946 - 3229331 | 50402.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





