Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8916 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4402 genes
Non-Coding Genes
208 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator csir | FIB21_19500 | Not Available | Negative | 3960278 - 3960940 | 25008.3 |
| gaba permease | FIB21_19505 | Not Available | Negative | 3960961 - 3962361 | 51113.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | FIB21_19510 | Not Available | Negative | 3962672 - 3963952 | 45649.2 |
| nadp-dependent succinate-semialdehyde dehydrogenase | FIB21_19515 | Not Available | Negative | 3963966 - 3965414 | 51803.1 |
| l-2-hydroxyglutarate oxidase | FIB21_19520 | Not Available | Negative | 3965437 - 3966705 | 46039.7 |
| carbon starvation induced protein csid | FIB21_19525 | Not Available | Negative | 3966725 - 3967702 | 37386.6 |
| shet2/espl2 family type iii secretion system effector toxin | FIB21_19530 | Not Available | Positive | 3967977 - 3969499 | 58192.0 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FIB21_19535 | Not Available | Negative | 3969468 - 3971204 | 67674.3 |
| isocitrate lyase | FIB21_19540 | Not Available | Negative | 3971485 - 3972789 | 47524.1 |
| malate synthase a | FIB21_19545 | Not Available | Negative | 3972819 - 3974420 | 60321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





