Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8916 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4402 genes
Non-Coding Genes
208 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | FIB21_18990 | Not Available | Negative | 3882419 - 3883507 | 38812.2 |
| shikimate kinase arok | FIB21_18995 | Not Available | Negative | 3883564 - 3884085 | 19539.2 |
| dna uptake porin hofq | FIB21_19000 | Not Available | Negative | 3884486 - 3885724 | 44719.9 |
| dna utilization protein hofp | FIB21_19005 | Not Available | Negative | 3885636 - 3886040 | 15099.1 |
| dna utilization protein hofo | FIB21_19010 | Not Available | Negative | 3886030 - 3886470 | 16877.1 |
| dna utilization protein hofn | FIB21_19015 | Not Available | Negative | 3886454 - 3886796 | 13226.5 |
| is200/is605 family element transposase accessory protein tnpb | FIB21_19020 | Not Available | Positive | 3886809 - 3887198 | 13964.6 |
| glsb/yeaq/ymge family stress response membrane protein | FIB21_19025 | Not Available | Positive | 3887425 - 3887673 | 8671.14 |
| protein yoaj | FIB21_19030 | Not Available | Negative | 3887732 - 3887806 | 2691.57 |
| yoak family small membrane protein | FIB21_19035 | Not Available | Negative | 3887809 - 3887907 | 3458.45 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





