Escherichia coli strain KCJK8916

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8916 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe, capable of thriving in both aerobic and anaerobic environments. This strain typically exists in pairs or singles, exhibiting mobility due to the presence of flagella. The optimal temperature for growth is 37°C, and it falls within the mesophilic temperature range. KCJK8916 is primarily host-associated and can be found in a diverse array of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and various other vertebrates and invertebrates. This strain is involved in numerous biotic relationships, predominantly as a free-living organism. The health implications of E. coli strain KCJK8916 are significant, as it is associated with a variety of infections in humans and animals. Pathogenic effects include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and more severe conditions such as hemolytic uremic syndrome (HUS) and septicemia. The strain's involvement in foodborne infections and gastrointestinal diseases further underscores its potential health risks. Given its wide host range and pathogenicity, E. coli strain KCJK8916 serves as a reminder of the intricate relationships between microorganisms and their hosts. Its ability to cause various health issues highlights the importance of monitoring and understanding microbial strains within diverse ecological contexts, particularly in environments where humans and animals interact closely.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8916

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8916
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8916

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4402 genes

Non-Coding Genes

208 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2877 domain-containing proteinFIB21_12740Not AvailablePositive2660483 - 266129829685.9
carbamate kinaseFIB21_12745Not AvailablePositive2661295 - 266218831659.1
5-(carboxyamino)imidazole ribonucleotide synthaseFIB21_12750Not AvailableNegative2662325 - 266339239479.4
5-(carboxyamino)imidazole ribonucleotide mutaseFIB21_12755Not AvailableNegative2663389 - 266389817781.3
udp-2,3-diacylglucosamine diphosphataseFIB21_12760Not AvailableNegative2664016 - 266473826925.8
peptidylprolyl isomerase bFIB21_12765Not AvailableNegative2664741 - 266523518168.5
cysteine--trna ligaseFIB21_12770Not AvailablePositive2665409 - 266679452186.9
metal-dependent hydrolaseFIB21_12775Not AvailableNegative2666830 - 266735119483.5
ribosome-associated protein ybcjFIB21_12780Not AvailableNegative2667459 - 26676717389.95
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldFIB21_12785Not AvailableNegative2667673 - 266853931015.6

Displaying genes 2581 – 2590 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total