Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8453 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319844 bp
Thymine Count
1324842 bp
Guanine Count
1354779 bp
Cytosine Count
1359947 bp
Genome Length
5359427 bp
Protein-coding Genes
5370 genes
Non-Coding Genes
219 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h48 family flagellin flic | FHR03_18050 | Not Available | Negative | 3646773 - 3648269 | 51267.8 |
| uracil-dna glycosylase | FHR03_18055 | Not Available | Positive | 3648723 - 3649412 | 25694.7 |
| trna/rrna methyltransferase | FHR03_18060 | Not Available | Negative | 3649460 - 3650497 | 37786.5 |
| thioredoxin trxc | FHR03_18065 | Not Available | Positive | 3650704 - 3651123 | 15555.6 |
| dtw domain-containing protein | FHR03_18070 | Not Available | Positive | 3651192 - 3651890 | 25968.4 |
| protein lysine acetyltransferase | FHR03_18075 | Not Available | Positive | 3651922 - 3654582 | 97921.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | FHR03_18080 | Not Available | Positive | 3654696 - 3656051 | 52804.8 |
| yfim family lipoprotein | FHR03_18085 | Not Available | Positive | 3656095 - 3656418 | 11729.8 |
| alpha-ketoglutarate permease | FHR03_18090 | Not Available | Negative | 3656415 - 3657713 | 47055.3 |
| sigma-54-dependent transcriptional regulator | FHR03_18100 | Not Available | Positive | 3658333 - 3660111 | 66073.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





