Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8453 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319844 bp
Thymine Count
1324842 bp
Guanine Count
1354779 bp
Cytosine Count
1359947 bp
Genome Length
5359427 bp
Protein-coding Genes
5370 genes
Non-Coding Genes
219 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | FHR03_15650 | Not Available | Positive | 3160470 - 3161531 | 38658.2 |
| l-asparagine permease | FHR03_15655 | Not Available | Negative | 3161646 - 3163145 | 54235.3 |
| glutathione s-transferase family protein | FHR03_15660 | Not Available | Positive | 3163411 - 3164028 | 23388.1 |
| hypothetical protein | FHR03_15665 | Not Available | Positive | 3164104 - 3164316 | 8244.62 |
| trna(fmet)-specific endonuclease vapc | FHR03_15670 | Not Available | Negative | 3165349 - 3165747 | 14895.2 |
| antitoxin | FHR03_15675 | Not Available | Negative | 3165747 - 3165974 | 8499.05 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FHR03_15680 | Not Available | Negative | 3166128 - 3166841 | 26996.5 |
| outer membrane protein assembly factor bamc | FHR03_15685 | Not Available | Negative | 3167054 - 3168088 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FHR03_15690 | Not Available | Negative | 3168105 - 3168983 | 31285.9 |
| glycine cleavage system transcriptional repressor | FHR03_15695 | Not Available | Positive | 3169129 - 3169701 | 20769.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





