Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8453 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319844 bp
Thymine Count
1324842 bp
Guanine Count
1354779 bp
Cytosine Count
1359947 bp
Genome Length
5359427 bp
Protein-coding Genes
5370 genes
Non-Coding Genes
219 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | FHR03_15440 | Not Available | Negative | 3118745 - 3119686 | 34367.1 |
| abc transporter atp-binding protein | FHR03_15445 | Not Available | Negative | 3119687 - 3120700 | 37042.9 |
| abc transporter substrate-binding protein | FHR03_15450 | Not Available | Negative | 3120718 - 3121863 | 42297.4 |
| plp-dependent aminotransferase family protein | FHR03_15455 | Not Available | Negative | 3122108 - 3123514 | 52766.8 |
| type ii toxin-antitoxin system antitoxin hicb | FHR03_15460 | Not Available | Negative | 3123593 - 3124009 | 15247.5 |
| duf2554 family protein | FHR03_15470 | Not Available | Positive | 3124431 - 3124661 | 8709.32 |
| 23s rrna 5-hydroxycytidine c2501 synthase | FHR03_15475 | Not Available | Negative | 3124753 - 3126714 | 72881.2 |
| helix-turn-helix domain-containing protein | FHR03_15480 | Not Available | Negative | 3126787 - 3127323 | 19761.5 |
| bene family transporter ydco | FHR03_15485 | Not Available | Positive | 3127376 - 3128590 | 42139.7 |
| transposase | FHR03_15490 | Not Available | Negative | 3128630 - 3128700 | 2329.83 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





