Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8453 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319844 bp
Thymine Count
1324842 bp
Guanine Count
1354779 bp
Cytosine Count
1359947 bp
Genome Length
5359427 bp
Protein-coding Genes
5370 genes
Non-Coding Genes
219 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | FHR03_13055 | Not Available | Positive | 2664991 - 2666274 | 46098.5 |
| metalloprotease | FHR03_13060 | Not Available | Positive | 2666443 - 2667207 | 26768.7 |
| (d)cmp kinase | FHR03_13065 | Not Available | Positive | 2667380 - 2668063 | 24747.8 |
| 30s ribosomal protein s1 | FHR03_13070 | Not Available | Positive | 2668174 - 2669847 | 61161.5 |
| integration host factor subunit beta | FHR03_13075 | Not Available | Positive | 2670007 - 2670291 | 10651.8 |
| comec family protein | FHR03_13080 | Not Available | Positive | 2670498 - 2672762 | 84500.9 |
| lipid a abc transporter atp-binding protein/permease msba | FHR03_13085 | Not Available | Positive | 2672799 - 2674547 | 64464.6 |
| tetraacyldisaccharide 4'-kinase | FHR03_13090 | Not Available | Positive | 2674544 - 2675123 | 21170.9 |
| dna uptake porin hofq | FHR03_13095 | Not Available | Positive | 2675124 - 2675988 | 31073.2 |
| shikimate kinase arok | FHR03_13100 | Not Available | Positive | 2676389 - 2676910 | 19539.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





