Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8453 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319844 bp
Thymine Count
1324842 bp
Guanine Count
1354779 bp
Cytosine Count
1359947 bp
Genome Length
5359427 bp
Protein-coding Genes
5370 genes
Non-Coding Genes
219 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | FHR03_13005 | Not Available | Positive | 2655432 - 2656688 | 46332.5 |
| peptide chain release factor 1 | FHR03_13010 | Not Available | Positive | 2656730 - 2657812 | 40519.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | FHR03_13015 | Not Available | Positive | 2657812 - 2658645 | 31028.8 |
| sirb family protein | FHR03_13020 | Not Available | Positive | 2658642 - 2659034 | 14625.7 |
| tetratricopeptide repeat-containing protein | FHR03_13025 | Not Available | Positive | 2659038 - 2659847 | 30843.1 |
| 3-deoxy-8-phosphooctulonate synthase | FHR03_13030 | Not Available | Positive | 2659883 - 2660565 | 24818.2 |
| hypothetical protein | FHR03_13035 | Not Available | Negative | 2660566 - 2660819 | 9918.09 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | FHR03_13040 | Not Available | Negative | 2661051 - 2662811 | 65681.1 |
| duf421 domain-containing protein | FHR03_13045 | Not Available | Positive | 2662941 - 2663633 | 26283.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | FHR03_13050 | Not Available | Positive | 2663832 - 2664920 | 39842.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





