Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8453 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319844 bp
Thymine Count
1324842 bp
Guanine Count
1354779 bp
Cytosine Count
1359947 bp
Genome Length
5359427 bp
Protein-coding Genes
5370 genes
Non-Coding Genes
219 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | FHR03_12955 | Not Available | Positive | 2643571 - 2645088 | 56491.3 |
| ubix family flavin prenyltransferase | FHR03_12960 | Not Available | Positive | 2645183 - 2645752 | 20696.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | FHR03_12965 | Not Available | Negative | 2645926 - 2647595 | 56341.4 |
| redox-regulated atpase ychf | FHR03_12970 | Not Available | Negative | 2648439 - 2649530 | 39669.6 |
| aminoacyl-trna hydrolase | FHR03_12975 | Not Available | Negative | 2649647 - 2650231 | 21083.5 |
| stress-induced protein ychh | FHR03_12980 | Not Available | Positive | 2650509 - 2650787 | 10486.9 |
| c4-dicarboxylic acid transporter daua | FHR03_12985 | Not Available | Negative | 2650842 - 2652521 | 59404.8 |
| ribose-phosphate pyrophosphokinase | FHR03_12990 | Not Available | Negative | 2652646 - 2653593 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | FHR03_12995 | Not Available | Negative | 2653744 - 2654595 | 30955.2 |
| lipoprotein localization protein lolb | FHR03_13000 | Not Available | Negative | 2654595 - 2655218 | 23552.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





