Corynebacterium tapiri strain LMG 28165

microaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium tapiri strain LMG 28165 is identified as a microaerophilic organism, indicating its requirement for reduced levels of oxygen for optimal growth. This trait suggests that the bacterium may thrive in environments where oxygen levels are lower than atmospheric concentration, which could be relevant for its ecological niches. The strain possesses a single replicon, indicating a streamlined genetic organization that often correlates with specific metabolic capabilities and adaptability to its environment. This may further suggest a specialization in its ecological role, as organisms with fewer replicons can sometimes demonstrate efficiency in resource utilization. The genomic data for Corynebacterium tapiri strain LMG 28165 is cataloged under the accession number VDHJ00000000.1, which enables researchers to access the complete genome sequence for further studies and comparisons with related strains. Understanding the genomic features of this strain can provide deeper insights into its biological functions and interactions within its ecosystem. From an ecological perspective, the microaerophilic nature of Corynebacterium tapiri suggests that it may play a role in specific biogeochemical cycles, particularly in environments where oxygen is limited, such as certain soils or animal microbiomes. Its adaptability to low-oxygen conditions may also allow it to coexist with other microbial species, contributing to the diversity and complexity of microbial communities in its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium tapiri
Strainstrain LMG 28165

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium tapiri strain LMG 28165
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium tapiri strain LMG 28165


Gene Summary

Adenine Count

423628 bp

Thymine Count

426609 bp

Guanine Count

700795 bp

Cytosine Count

702690 bp

Genome Length

2253722 bp

Protein-coding Genes

2035 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l13FHE74_04775Not AvailableNegative1015623 - 101606616536.8
wxg100 family type vii secretion targetFHE74_04780Not AvailableNegative1016324 - 101661110415.0
wxg100 family type vii secretion targetFHE74_04785Not AvailableNegative1016631 - 101694511104.7
type vii secretion-associated proteinFHE74_04790Not AvailableNegative1017067 - 101802933836.5
type vii secretion protein ecccaFHE74_04795Not AvailableNegative1018029 - 1021667129640.0
type vii secretion integral membrane protein eccdFHE74_04800Not AvailablePositive1021848 - 102320645153.4
hypothetical proteinFHE74_04805Not AvailablePositive1023203 - 102440841572.2
tigr02611 family proteinFHE74_04810Not AvailableNegative1024302 - 102473616482.6
type vii secretion protein eccbFHE74_04815Not AvailableNegative1024778 - 102600442186.6
trna pseudouridine(38-40) synthase truaFHE74_04820Not AvailableNegative1026045 - 102691732106.2

Displaying genes 951 – 960 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.