Corynebacterium tapiri strain LMG 28165

microaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium tapiri strain LMG 28165 is identified as a microaerophilic organism, indicating its requirement for reduced levels of oxygen for optimal growth. This trait suggests that the bacterium may thrive in environments where oxygen levels are lower than atmospheric concentration, which could be relevant for its ecological niches. The strain possesses a single replicon, indicating a streamlined genetic organization that often correlates with specific metabolic capabilities and adaptability to its environment. This may further suggest a specialization in its ecological role, as organisms with fewer replicons can sometimes demonstrate efficiency in resource utilization. The genomic data for Corynebacterium tapiri strain LMG 28165 is cataloged under the accession number VDHJ00000000.1, which enables researchers to access the complete genome sequence for further studies and comparisons with related strains. Understanding the genomic features of this strain can provide deeper insights into its biological functions and interactions within its ecosystem. From an ecological perspective, the microaerophilic nature of Corynebacterium tapiri suggests that it may play a role in specific biogeochemical cycles, particularly in environments where oxygen is limited, such as certain soils or animal microbiomes. Its adaptability to low-oxygen conditions may also allow it to coexist with other microbial species, contributing to the diversity and complexity of microbial communities in its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium tapiri
Strainstrain LMG 28165

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium tapiri strain LMG 28165
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium tapiri strain LMG 28165 Scaffold36_1, whole genome

Gene Summary

Adenine Count

423628 bp

Thymine Count

426609 bp

Guanine Count

700795 bp

Cytosine Count

702690 bp

Genome Length

2253722 bp

Protein-coding Genes

2035 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdFHE74_05530Not AvailablePositive1162994 - 116398034539.1
riboflavin synthaseFHE74_05535Not AvailablePositive1163998 - 116463022289.5
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiFHE74_05540Not AvailablePositive1164652 - 116592346034.3
6,7-dimethyl-8-ribityllumazine synthaseFHE74_05545Not AvailablePositive1165920 - 116639916736.9
ph domain-containing proteinFHE74_05550Not AvailablePositive1166411 - 116697120628.9
excinuclease abc subunit uvrcFHE74_05555Not AvailablePositive1166981 - 116903577194.6
rnase adapter rapzFHE74_05560Not AvailablePositive1169052 - 116995132833.0
uridine diphosphate-n-acetylglucosamine-binding protein yvckFHE74_05565Not AvailablePositive1169980 - 117095134535.6
dna-binding protein whiaFHE74_05570Not AvailablePositive1170938 - 117198737745.9
type i glyceraldehyde-3-phosphate dehydrogenaseFHE74_05575Not AvailablePositive1172158 - 117316236434.1

Displaying genes 1101 – 1110 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.