Amycolatopsis alkalitolerans strain SYSUP0005

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis alkalitolerans strain SYSUP0005 is a notable bacterium characterized by its presence of flagella, which suggests motility capabilities that may aid in its ecological interactions. This strain possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Amycolatopsis alkalitolerans strain SYSUP0005 can be accessed through the accession number VDFW00000000.1, which provides a resource for further research into its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the strain's ability to colonize substrates in diverse habitats. This motility could facilitate the exploration of environments where nutrient availability fluctuates, allowing the bacterium to thrive in alkaline conditions. Given its alkalitolerant nature, strain SYSUP0005 may play a crucial role in biogeochemical cycles, particularly in alkaline soils or aquatic systems, where it could contribute to nutrient cycling and organic matter degradation. Overall, Amycolatopsis alkalitolerans strain SYSUP0005 exemplifies the adaptability of microorganisms in extreme environments, highlighting the potential for biotechnological applications in bioremediation or bioaugmentation in alkaline settings. Its motility and genomic features position it as an interesting subject for further study in microbial ecology and applied microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis alkalitolerans
Strainstrain SYSUP0005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis alkalitolerans strain SYSUP0005

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secdFG385_11780Not AvailableNegative2375225 - 237679654896.1
preprotein translocase subunit yajcFG385_11785Not AvailableNegative2376934 - 237732614117.8
holliday junction branch migration dna helicase ruvbFG385_11790Not AvailableNegative2377423 - 237848437964.3
holliday junction branch migration protein ruvaFG385_11795Not AvailableNegative2378494 - 237908420284.7
crossover junction endodeoxyribonuclease ruvcFG385_11800Not AvailableNegative2379081 - 237965920059.3
duf4262 domain-containing proteinFG385_11805Not AvailableNegative2379753 - 238028619130.3
yebc/pmpr family dna-binding transcriptional regulatorFG385_11810Not AvailableNegative2380600 - 238134926694.1
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtFG385_11815Not AvailableNegative2381367 - 238197222023.6
hypothetical proteinFG385_11820Not AvailablePositive2382068 - 23822747830.01
type ii toxin-antitoxin system vapc family toxinFG385_11825Not AvailablePositive2382274 - 238267814670.8

Displaying genes 2281 – 2290 of 6509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.