Amycolatopsis alkalitolerans strain SYSUP0005

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis alkalitolerans strain SYSUP0005 is a notable bacterium characterized by its presence of flagella, which suggests motility capabilities that may aid in its ecological interactions. This strain possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Amycolatopsis alkalitolerans strain SYSUP0005 can be accessed through the accession number VDFW00000000.1, which provides a resource for further research into its genetic makeup and potential applications. The presence of flagella is particularly significant as it may enhance the strain's ability to colonize substrates in diverse habitats. This motility could facilitate the exploration of environments where nutrient availability fluctuates, allowing the bacterium to thrive in alkaline conditions. Given its alkalitolerant nature, strain SYSUP0005 may play a crucial role in biogeochemical cycles, particularly in alkaline soils or aquatic systems, where it could contribute to nutrient cycling and organic matter degradation. Overall, Amycolatopsis alkalitolerans strain SYSUP0005 exemplifies the adaptability of microorganisms in extreme environments, highlighting the potential for biotechnological applications in bioremediation or bioaugmentation in alkaline settings. Its motility and genomic features position it as an interesting subject for further study in microbial ecology and applied microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis alkalitolerans
Strainstrain SYSUP0005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis alkalitolerans strain SYSUP0005

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ydcf family proteinFG385_07660Not AvailablePositive1557031 - 155766922653.1
hypothetical proteinFG385_07665Not AvailableNegative1557666 - 155851129575.8
deoxyguanosinetriphosphate triphosphohydrolaseFG385_07670Not AvailablePositive1558576 - 155988046773.6
serpin family proteinFG385_07675Not AvailablePositive1559975 - 156107839186.8
yfho family proteinFG385_07680Not AvailablePositive1561086 - 156287064703.9
carboxymuconolactone decarboxylase family proteinFG385_07685Not AvailablePositive1563022 - 156359720854.0
sigma-70 family rna polymerase sigma factorFG385_07690Not AvailableNegative1563551 - 156448633916.9
dna primaseFG385_07695Not AvailablePositive1564510 - 156639668707.4
hypothetical proteinFG385_07700Not AvailablePositive1566401 - 156691618366.1
trans-aconitate 2-methyltransferaseFG385_07705Not AvailablePositive1566932 - 156766926930.9

Displaying genes 1481 – 1490 of 6509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.