Rubellimicrobium roseum strain YIM 48858

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Rubellimicrobium

Description

Rubellimicrobium roseum strain YIM 48858 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This strain is part of the diverse microbial community and contributes to the ecological dynamics within its environment. The genomic data for Rubellimicrobium roseum strain YIM 48858 is cataloged under the accession number VDFV00000000.1, which provides a reference for researchers studying its genetic makeup and potential applications. As a member of the Rubellimicrobium genus, this strain may play a role in various biological processes, including nutrient cycling and interactions within microbial communities. The Gram-negative nature of Rubellimicrobium roseum indicates that it possesses an outer membrane, which can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium suggests a potential adaptability to different habitats, enhancing its ecological versatility. Understanding the traits of Rubellimicrobium roseum strain YIM 48858 is crucial for appreciating its role within its ecosystem. Its single replicon may also provide insights into its genetic stability and evolutionary adaptations. Overall, the characteristics of this bacterium highlight its potential significance in microbiological research and ecological studies, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRubellimicrobium
SpeciesRubellimicrobium roseum
Strainstrain YIM 48858

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubellimicrobium roseum strain YIM 48858 Scaffold152_1, whole

Gene Summary

Adenine Count

749264 bp

Thymine Count

748645 bp

Guanine Count

1670341 bp

Cytosine Count

1682995 bp

Genome Length

4851245 bp

Protein-coding Genes

4466 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is5 family transposaseFHG71_20025Not AvailablePositive4176970 - 417790234568.6
m48 family metallopeptidaseFHG71_20030Not AvailablePositive4177905 - 41781027530.13
hydantoinase b/oxoprolinase family proteinFHG71_20035Not AvailableNegative4178180 - 417974254981.4
m24 family metallopeptidaseFHG71_20040Not AvailableNegative4179739 - 418083038990.8
hydantoinase b/oxoprolinase family proteinFHG71_20045Not AvailableNegative4180833 - 418248259884.2
hydantoinase/oxoprolinase family proteinFHG71_20050Not AvailableNegative4182492 - 418456174949.3
gaf domain-containing proteinFHG71_20055Not AvailableNegative4184558 - 418500416152.6
abc transporter atp-binding proteinFHG71_20060Not AvailableNegative4185049 - 418584328620.7
abc transporter atp-binding proteinFHG71_20065Not AvailableNegative4185840 - 418670631194.8
abc transporter permeaseFHG71_20070Not AvailableNegative4186703 - 418753629944.5

Displaying genes 3921 – 3930 of 4532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.