Rubellimicrobium roseum strain YIM 48858

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Rubellimicrobium

Description

Rubellimicrobium roseum strain YIM 48858 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This strain is part of the diverse microbial community and contributes to the ecological dynamics within its environment. The genomic data for Rubellimicrobium roseum strain YIM 48858 is cataloged under the accession number VDFV00000000.1, which provides a reference for researchers studying its genetic makeup and potential applications. As a member of the Rubellimicrobium genus, this strain may play a role in various biological processes, including nutrient cycling and interactions within microbial communities. The Gram-negative nature of Rubellimicrobium roseum indicates that it possesses an outer membrane, which can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium suggests a potential adaptability to different habitats, enhancing its ecological versatility. Understanding the traits of Rubellimicrobium roseum strain YIM 48858 is crucial for appreciating its role within its ecosystem. Its single replicon may also provide insights into its genetic stability and evolutionary adaptations. Overall, the characteristics of this bacterium highlight its potential significance in microbiological research and ecological studies, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRubellimicrobium
SpeciesRubellimicrobium roseum
Strainstrain YIM 48858

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubellimicrobium roseum strain YIM 48858 Scaffold152_1, whole

Gene Summary

Adenine Count

749264 bp

Thymine Count

748645 bp

Guanine Count

1670341 bp

Cytosine Count

1682995 bp

Genome Length

4851245 bp

Protein-coding Genes

4466 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseFHG71_12675Not AvailablePositive2679829 - 268055124871.7
hypothetical proteinFHG71_12680Not AvailablePositive2680551 - 268100016949.4
imidazole glycerol phosphate synthase subunit hisfFHG71_12685Not AvailablePositive2681038 - 268179926325.5
phosphoribosyl-atp diphosphataseFHG71_12690Not AvailablePositive2681796 - 268214012221.4
coa-binding proteinFHG71_12695Not AvailableNegative2682137 - 268257415530.8
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbFHG71_12700Not AvailableNegative2682747 - 268355028213.8
o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthaseFHG71_12705Not AvailablePositive2684112 - 268541946516.6
duf541 domain-containing proteinFHG71_12710Not AvailableNegative2685457 - 268616423827.4
potassium transporterFHG71_12720Not AvailablePositive2689451 - 269126864652.7
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseFHG71_12725Not AvailableNegative2691265 - 269227534488.4

Displaying genes 2491 – 2500 of 4532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.