Rubellimicrobium roseum strain YIM 48858

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Rubellimicrobium

Description

Rubellimicrobium roseum strain YIM 48858 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This strain is part of the diverse microbial community and contributes to the ecological dynamics within its environment. The genomic data for Rubellimicrobium roseum strain YIM 48858 is cataloged under the accession number VDFV00000000.1, which provides a reference for researchers studying its genetic makeup and potential applications. As a member of the Rubellimicrobium genus, this strain may play a role in various biological processes, including nutrient cycling and interactions within microbial communities. The Gram-negative nature of Rubellimicrobium roseum indicates that it possesses an outer membrane, which can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium suggests a potential adaptability to different habitats, enhancing its ecological versatility. Understanding the traits of Rubellimicrobium roseum strain YIM 48858 is crucial for appreciating its role within its ecosystem. Its single replicon may also provide insights into its genetic stability and evolutionary adaptations. Overall, the characteristics of this bacterium highlight its potential significance in microbiological research and ecological studies, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRubellimicrobium
SpeciesRubellimicrobium roseum
Strainstrain YIM 48858

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubellimicrobium roseum strain YIM 48858 Scaffold152_1, whole

Gene Summary

Adenine Count

749264 bp

Thymine Count

748645 bp

Guanine Count

1670341 bp

Cytosine Count

1682995 bp

Genome Length

4851245 bp

Protein-coding Genes

4466 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome cFHG71_12170Not AvailableNegative2575765 - 25760439329.99
xanthine dehydrogenase family protein molybdopterin-binding subunitFHG71_12175Not AvailableNegative2576097 - 257825977417.9
(2fe-2s)-binding proteinFHG71_12180Not AvailableNegative2578271 - 257872316093.3
nucleotidyltransferase family proteinFHG71_12185Not AvailableNegative2578772 - 257939221510.9
xdhc family proteinFHG71_12190Not AvailableNegative2579389 - 258037234504.4
hypothetical proteinFHG71_12195Not AvailableNegative2580499 - 258116422773.3
prepilin peptidaseFHG71_12200Not AvailablePositive2581163 - 258171118120.5
type ii secretion system protein gspgFHG71_12205Not AvailablePositive2581708 - 258213615166.1
hypothetical proteinFHG71_12210Not AvailableNegative2582094 - 258270521032.1
prepilin-type n-terminal cleavage/methylation domain-containing proteinFHG71_12215Not AvailableNegative2582702 - 258310614439.4

Displaying genes 2391 – 2400 of 4532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.