Rubellimicrobium roseum strain YIM 48858

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Rubellimicrobium

Description

Rubellimicrobium roseum strain YIM 48858 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This strain is part of the diverse microbial community and contributes to the ecological dynamics within its environment. The genomic data for Rubellimicrobium roseum strain YIM 48858 is cataloged under the accession number VDFV00000000.1, which provides a reference for researchers studying its genetic makeup and potential applications. As a member of the Rubellimicrobium genus, this strain may play a role in various biological processes, including nutrient cycling and interactions within microbial communities. The Gram-negative nature of Rubellimicrobium roseum indicates that it possesses an outer membrane, which can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium suggests a potential adaptability to different habitats, enhancing its ecological versatility. Understanding the traits of Rubellimicrobium roseum strain YIM 48858 is crucial for appreciating its role within its ecosystem. Its single replicon may also provide insights into its genetic stability and evolutionary adaptations. Overall, the characteristics of this bacterium highlight its potential significance in microbiological research and ecological studies, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRubellimicrobium
SpeciesRubellimicrobium roseum
Strainstrain YIM 48858

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubellimicrobium roseum strain YIM 48858 Scaffold152_1, whole

Gene Summary

Adenine Count

749264 bp

Thymine Count

748645 bp

Guanine Count

1670341 bp

Cytosine Count

1682995 bp

Genome Length

4851245 bp

Protein-coding Genes

4466 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-aminolevulinate synthaseFHG71_11465Not AvailablePositive2427920 - 24280605070.07
duf4115 domain-containing proteinFHG71_11470Not AvailablePositive2428177 - 242952046225.7
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseFHG71_11475Not AvailablePositive2429593 - 243072940322.6
hypothetical proteinFHG71_11480Not AvailableNegative2430827 - 243126715644.1
mfs transporterFHG71_11485Not AvailablePositive2431197 - 243269351332.9
dsba family proteinFHG71_11490Not AvailableNegative2432695 - 243344127072.2
n-acetylmuramoyl-l-alanine amidaseFHG71_11495Not AvailablePositive2433596 - 243479541357.1
class i sam-dependent methyltransferaseFHG71_11500Not AvailableNegative2434792 - 243539722378.7
pbp1a family penicillin-binding proteinFHG71_11505Not AvailablePositive2435566 - 243805590594.9
peptide chain release factor 2FHG71_11510Not AvailablePositive2438119 - 243924641481.4

Displaying genes 2251 – 2260 of 4532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.