Rubellimicrobium roseum strain YIM 48858

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Rubellimicrobium

Description

Rubellimicrobium roseum strain YIM 48858 is a Gram-negative, rod-shaped bacterium characterized by its single replicon. This strain is part of the diverse microbial community and contributes to the ecological dynamics within its environment. The genomic data for Rubellimicrobium roseum strain YIM 48858 is cataloged under the accession number VDFV00000000.1, which provides a reference for researchers studying its genetic makeup and potential applications. As a member of the Rubellimicrobium genus, this strain may play a role in various biological processes, including nutrient cycling and interactions within microbial communities. The Gram-negative nature of Rubellimicrobium roseum indicates that it possesses an outer membrane, which can influence its interactions with the environment and other microorganisms. The rod shape of this bacterium suggests a potential adaptability to different habitats, enhancing its ecological versatility. Understanding the traits of Rubellimicrobium roseum strain YIM 48858 is crucial for appreciating its role within its ecosystem. Its single replicon may also provide insights into its genetic stability and evolutionary adaptations. Overall, the characteristics of this bacterium highlight its potential significance in microbiological research and ecological studies, contributing to our understanding of microbial diversity and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRubellimicrobium
SpeciesRubellimicrobium roseum
Strainstrain YIM 48858

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubellimicrobium roseum strain YIM 48858 Scaffold152_1, whole

Gene Summary

Adenine Count

749264 bp

Thymine Count

748645 bp

Guanine Count

1670341 bp

Cytosine Count

1682995 bp

Genome Length

4851245 bp

Protein-coding Genes

4466 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
enoyl-coa hydratase family proteinFHG71_05585Not AvailablePositive1208440 - 120925229327.3
acyl-coa dehydrogenaseFHG71_05590Not AvailablePositive1209252 - 121038840095.2
acyl-coa thioesteraseFHG71_05595Not AvailablePositive1210385 - 121081016252.7
rida family proteinFHG71_05600Not AvailablePositive1210797 - 121120714749.6
benzoate-coa ligase family proteinFHG71_05605Not AvailablePositive1211204 - 121284759744.5
tryptophan 2,3-dioxygenaseFHG71_05610Not AvailablePositive1212844 - 121368032460.8
amino acid abc transporter substrate-binding proteinFHG71_05615Not AvailablePositive1213824 - 121462728514.7
amino acid abc transporter permeaseFHG71_05620Not AvailablePositive1214677 - 121535124163.5
aminotransferase class v-fold plp-dependent enzymeFHG71_05625Not AvailablePositive1215362 - 121651641577.6
llm class flavin-dependent oxidoreductaseFHG71_05630Not AvailablePositive1216562 - 121767740813.3

Displaying genes 1121 – 1130 of 4532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.