Salmonella enterica subsp. enterica serovar Derby strain HIY0016

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Derby strain HIY0016 is a Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This strain is categorized as a microaerophilic chemoorganotroph, indicating that it requires oxygen at lower levels than are found in the atmosphere for optimal growth. It typically thrives at an optimal temperature of 37°C, within a mesophilic temperature range. The cells of this strain are arranged in chains or singles, showcasing its unique cellular organization. Salmonella enterica serovar Derby strain HIY0016 is free-living and has a single replicon, which is indicative of its genomic structure. It features a double membrane system, common to Gram-negative bacteria, which plays a crucial role in its interaction with the environment and host organisms. The ecological implications of this strain are significant, as it is host-associated and may be involved in various biotic relationships. Its ability to thrive in specific conditions can influence its pathogenic potential and the dynamics of microbial communities in host environments. Understanding the traits of Salmonella enterica serovar Derby strain HIY0016 can provide insights into its role in food safety and public health, particularly in relation to its transmission and impact on host organisms. The accession number for this strain is VDED00000000.2, which can be referenced for further genetic and phenotypic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Derby strain HIY0016

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Derby strain HIY0016
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Derby strain HIY0016

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4449 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase-n subunit alphaFG572_014985Not AvailablePositive3104606 - 3107656112365.0
formate dehydrogenase subunit betaFG572_014990Not AvailablePositive3107669 - 310857133056.9
formate dehydrogenase cytochrome b556 subunitFG572_014995Not AvailablePositive3108568 - 310920324698.8
formate dehydrogenase accessory protein fdheFG572_015000Not AvailablePositive3109200 - 311012934707.5
dna-binding transcriptional regulatorFG572_015005Not AvailableNegative3110176 - 311046610972.2
type ii toxin-antitoxin system rele/pare family toxinFG572_015010Not AvailableNegative3110467 - 311077812389.1
alpha/beta hydrolaseFG572_015015Not AvailablePositive3110996 - 311192533790.2
type ii toxin-antitoxin system higb family toxinFG572_015020Not AvailablePositive3112011 - 311232212437.1
type ii toxin-antitoxin system higa family antitoxinFG572_015025Not AvailablePositive3112319 - 311276516735.0
gnat family n-acetyltransferaseFG572_015030Not AvailableNegative3112780 - 311376936919.3

Displaying genes 3111 – 3120 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.