Salmonella enterica subsp. enterica serovar Derby strain HIY0016

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Derby strain HIY0016 is a Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This strain is categorized as a microaerophilic chemoorganotroph, indicating that it requires oxygen at lower levels than are found in the atmosphere for optimal growth. It typically thrives at an optimal temperature of 37°C, within a mesophilic temperature range. The cells of this strain are arranged in chains or singles, showcasing its unique cellular organization. Salmonella enterica serovar Derby strain HIY0016 is free-living and has a single replicon, which is indicative of its genomic structure. It features a double membrane system, common to Gram-negative bacteria, which plays a crucial role in its interaction with the environment and host organisms. The ecological implications of this strain are significant, as it is host-associated and may be involved in various biotic relationships. Its ability to thrive in specific conditions can influence its pathogenic potential and the dynamics of microbial communities in host environments. Understanding the traits of Salmonella enterica serovar Derby strain HIY0016 can provide insights into its role in food safety and public health, particularly in relation to its transmission and impact on host organisms. The accession number for this strain is VDED00000000.2, which can be referenced for further genetic and phenotypic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Derby strain HIY0016

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Derby strain HIY0016
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Derby strain HIY0016

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4449 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-amino-4,6-dideoxygalactose transaminaseFG572_013920Not AvailableNegative2908532 - 290966241977.4
dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferaseFG572_013925Not AvailableNegative2909667 - 291037125832.7
sugar nucleotidyltransferaseFG572_013930Not AvailableNegative2910322 - 29105468311.1
dtdp-glucose 4,6-dehydrataseFG572_013935Not AvailableNegative2910579 - 291164639532.7
udp-n-acetyl-d-mannosamine dehydrogenaseFG572_013940Not AvailableNegative2911646 - 291290845295.9
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)FG572_013945Not AvailableNegative2912905 - 291403542151.9
eca polysaccharide chain length modulation proteinFG572_013950Not AvailableNegative2914091 - 291513739463.3
udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferaseFG572_013955Not AvailableNegative2915149 - 291625241089.1
transcription termination factor rhoFG572_013960Not AvailableNegative2916482 - 291774146996.0
rho operon leader peptideFG572_013965Not AvailableNegative2917829 - 29179635046.08

Displaying genes 2901 – 2910 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.