Salmonella enterica subsp. enterica serovar Derby strain HIY0016

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Derby strain HIY0016 is a Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This strain is categorized as a microaerophilic chemoorganotroph, indicating that it requires oxygen at lower levels than are found in the atmosphere for optimal growth. It typically thrives at an optimal temperature of 37°C, within a mesophilic temperature range. The cells of this strain are arranged in chains or singles, showcasing its unique cellular organization. Salmonella enterica serovar Derby strain HIY0016 is free-living and has a single replicon, which is indicative of its genomic structure. It features a double membrane system, common to Gram-negative bacteria, which plays a crucial role in its interaction with the environment and host organisms. The ecological implications of this strain are significant, as it is host-associated and may be involved in various biotic relationships. Its ability to thrive in specific conditions can influence its pathogenic potential and the dynamics of microbial communities in host environments. Understanding the traits of Salmonella enterica serovar Derby strain HIY0016 can provide insights into its role in food safety and public health, particularly in relation to its transmission and impact on host organisms. The accession number for this strain is VDED00000000.2, which can be referenced for further genetic and phenotypic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Derby strain HIY0016

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Derby strain HIY0016
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Derby strain HIY0016

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4449 genes

Non-Coding Genes

226 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide core heptose(i) kinase rfapFG572_008630Not AvailableNegative1820507 - 182130430997.9
glycosyltransferase family 4 proteinFG572_008635Not AvailableNegative1821297 - 182242142516.5
lipopolysaccharide core heptosyltransferase rfaqFG572_008640Not AvailableNegative1822418 - 182348840242.8
3-deoxy-d-manno-octulosonic acid transferaseFG572_008645Not AvailablePositive1823897 - 182517447315.8
pantetheine-phosphate adenylyltransferaseFG572_008650Not AvailablePositive1825183 - 182566217926.8
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseFG572_008655Not AvailableNegative1825686 - 182649530224.6
50s ribosomal protein l33FG572_008660Not AvailableNegative1826593 - 18267606371.94
50s ribosomal protein l28FG572_008665Not AvailableNegative1826781 - 18270179051.08
jab domain-containing proteinFG572_008670Not AvailableNegative1827235 - 182790024891.4
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcFG572_008675Not AvailablePositive1828073 - 182929643575.8

Displaying genes 1861 – 1870 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.