Salmonella enterica subsp. enterica serovar Derby strain HIY0031

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Derby strain HIY0031 is a Gram-negative bacterium, classified as a chemoorganotroph, which indicates its reliance on organic compounds for energy. This strain exhibits a microaerophilic oxygen requirement, thriving in environments with lower oxygen levels. Morphologically, it is characterized by a spirilla shape and typically appears in chains or as singles. HIY0031 possesses flagella, which are structures that facilitate motility; however, this strain is noted to be non-motile. It has a mesophilic optimal growth temperature of 37°C, which aligns with the typical body temperature of warm-blooded hosts, further indicating its host-associated habitat. The structure of its cell envelope consists of two membranes, a trait common to Gram-negative bacteria. In terms of genetic organization, HIY0031 has one replicon, suggesting a relatively simple genetic architecture. The strain's biotic relationship is classified as free-living, which may allow it to survive outside of host organisms under specific environmental conditions. Understanding the traits of Salmonella enterica serovar Derby strain HIY0031 provides insight into its ecological role. Its adaptation to a microaerophilic environment and mesophilic temperature range suggests an evolutionary relationship with warm-blooded hosts, where it may contribute to the dynamics of gut microbiota or cause infections. The presence of flagella, despite noted non-motility, could imply a potential for environmental persistence or interaction with host tissues, further emphasizing its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Derby strain HIY0031

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Derby strain HIY0031
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Derby strain HIY0031

Gene Summary

Adenine Count

1155368 bp

Thymine Count

1155937 bp

Guanine Count

1268523 bp

Cytosine Count

1247956 bp

Genome Length

4827784 bp

Protein-coding Genes

4451 genes

Non-Coding Genes

255 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lapa family proteinFG580_015605Not AvailablePositive3200553 - 320086111386.2
lipopolysaccharide assembly protein lapbFG580_015610Not AvailablePositive3200868 - 320203744566.7
orotidine-5'-phosphate decarboxylaseFG580_015615Not AvailablePositive3202228 - 320296526329.7
stress response translation initiation inhibitor ycihFG580_015620Not AvailablePositive3202965 - 320329111527.2
osmotically-inducible lipoprotein osmbFG580_015625Not AvailableNegative3203411 - 32036296936.52
deor/glpr transcriptional regulatorFG580_015630Not AvailableNegative3203888 - 320464027479.1
hypothetical proteinFG580_015635Not AvailableNegative3204727 - 32049066430.61
cyclic di-gmp phosphodiesteraseFG580_015640Not AvailableNegative3205028 - 320701074696.6
exoribonuclease iiFG580_015645Not AvailableNegative3207272 - 320920672440.4
cmd domain-containing proteinFG580_015650Not AvailableNegative3209295 - 321042842403.0

Displaying genes 3191 – 3200 of 4706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.