Salmonella enterica subsp. enterica serovar Derby strain HIY0031

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Derby strain HIY0031 is a Gram-negative bacterium, classified as a chemoorganotroph, which indicates its reliance on organic compounds for energy. This strain exhibits a microaerophilic oxygen requirement, thriving in environments with lower oxygen levels. Morphologically, it is characterized by a spirilla shape and typically appears in chains or as singles. HIY0031 possesses flagella, which are structures that facilitate motility; however, this strain is noted to be non-motile. It has a mesophilic optimal growth temperature of 37°C, which aligns with the typical body temperature of warm-blooded hosts, further indicating its host-associated habitat. The structure of its cell envelope consists of two membranes, a trait common to Gram-negative bacteria. In terms of genetic organization, HIY0031 has one replicon, suggesting a relatively simple genetic architecture. The strain's biotic relationship is classified as free-living, which may allow it to survive outside of host organisms under specific environmental conditions. Understanding the traits of Salmonella enterica serovar Derby strain HIY0031 provides insight into its ecological role. Its adaptation to a microaerophilic environment and mesophilic temperature range suggests an evolutionary relationship with warm-blooded hosts, where it may contribute to the dynamics of gut microbiota or cause infections. The presence of flagella, despite noted non-motility, could imply a potential for environmental persistence or interaction with host tissues, further emphasizing its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. enterica serovar Derby strain HIY0031

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Derby strain HIY0031
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. enterica serovar Derby strain HIY0031

Gene Summary

Adenine Count

1155368 bp

Thymine Count

1155937 bp

Guanine Count

1268523 bp

Cytosine Count

1247956 bp

Genome Length

4827784 bp

Protein-coding Genes

4451 genes

Non-Coding Genes

255 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtpase obgeFG580_000490Not AvailablePositive97053 - 9822543106.0
serine-type d-ala-d-ala carboxypeptidaseFG580_000495Not AvailableNegative98356 - 9978951987.6
transcription elongation factor greaFG580_000500Not AvailablePositive100037 - 10051317657.0
ribosome assembly rna-binding protein yhbyFG580_000505Not AvailableNegative100669 - 10096210801.4
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeFG580_000510Not AvailablePositive101089 - 10171523239.3
atp-dependent zinc metalloprotease ftshFG580_000515Not AvailablePositive101819 - 10375370833.4
dihydropteroate synthaseFG580_000520Not AvailablePositive103858 - 10470630485.8
phosphoglucosamine mutaseFG580_000525Not AvailablePositive104699 - 10603647444.3
preprotein translocase subunit secgFG580_000530Not AvailablePositive106259 - 10659111393.9
Trna-leuNot AvailableNot AvailablePositive106605 - 106691Not Available

Displaying genes 281 – 290 of 4706 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.