Tamlana fucoidanivorans strain CW2-9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Allotamlana

Description

Tamlana fucoidanivorans strain CW2-9 is characterized by having a single replicon, indicating a streamlined genome structure that may contribute to its adaptability in specific environments. The strain is cataloged under the accession number VDCS00000000.1, which serves as a reference for genetic and taxonomic studies. The presence of only one replicon suggests a potential for efficient replication and resource allocation, traits that may be advantageous for survival in competitive ecological niches. This streamlined genomic architecture can also facilitate faster evolutionary responses to environmental changes, allowing T. fucoidanivorans to thrive in conditions where other organisms may struggle. In terms of ecological insights, T. fucoidanivorans is likely involved in the degradation of fucoidan, a polysaccharide found in brown seaweeds. This capability positions the strain as a significant player in marine ecosystems, particularly in nutrient cycling and organic matter decomposition. By breaking down fucoidan, T. fucoidanivorans contributes to the recycling of nutrients, thereby supporting the broader marine food web and enhancing ecosystem health. In summary, Tamlana fucoidanivorans strain CW2-9, with its single replicon and specific ecological role, exemplifies the intricate relationships within marine environments, emphasizing the importance of microbial diversity in sustaining ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAllotamlana
SpeciesAllotamlana fucoidanivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tamlana fucoidanivorans strain CW2-9 NODE_152, whole genome

Gene Summary

Adenine Count

1314619 bp

Thymine Count

1327230 bp

Guanine Count

653463 bp

Cytosine Count

727389 bp

Genome Length

4022701 bp

Protein-coding Genes

3345 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secdfFGF67_03880Not AvailableNegative950903 - 953899109348.0
hypothetical proteinFGF67_03885Not AvailableNegative954081 - 95469822828.0
malate dehydrogenaseFGF67_03890Not AvailableNegative954771 - 95569732220.1
hypothetical proteinFGF67_03895Not AvailableNegative955960 - 95698537040.9
membrane metalloproteaseFGF67_03900Not AvailablePositive957194 - 95796128387.2
dna topoisomerase (atp-hydrolyzing) subunit bFGF67_03905Not AvailableNegative958026 - 95996672028.6
porinFGF67_03910Not AvailablePositive960378 - 96165548471.4
hypothetical proteinFGF67_03915Not AvailablePositive961911 - 9621659350.05
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataFGF67_03920Not AvailablePositive962169 - 96356950279.8
bifunctional amidotransferase subunit gatb/aspartate--trna ligase aspsFGF67_03925Not AvailablePositive963569 - 966913126095.0

Displaying genes 771 – 780 of 3392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.